grn

Information grn

Description

The gene grain is referred to in FlyBase by the symbol Dmelgrn (CG9656, FBgn0001138). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (all unique). Gene sequence location is 3R:8147368..8181444. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; sequence-specific DNA binding; zinc ion binding. It is involved in the biological process described with 6 unique terms, many of which group under: developmental process; tissue development; cell projection organization; neuron projection guidance; anatomical structure development. 27 alleles are reported. The phenotypes of these alleles manifest in: abdomen; abdominal segment 8; adult external thorax; integumentary system; embryonic abdominal segment. The phenotypic classes of alleles include: neuroanatomy defective; visible; lethal - all die before end of embryonic stage; some die during embryonic stage; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 06-12 hour embryonic stages.

Full Name

grain

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
23,869
Non-redundant peaks
23,869

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
40962
Official Gene Name
grn
JASPAR
Ensembl
FBgn0001138
UniProt
P91623
Genevisible
P91623
RefSeq
NM_169206
Aliases
grn
All peaks grn
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Non redundant peaks grn
Download BED file
SEQUENCES grn
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Datasets Table for grn

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
grn adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR909QHH 23,869
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks