msl-3

Information msl-3

Description

The gene male-specific lethal 3 is referred to in FlyBase by the symbol Dmelmsl-3 (CG8631, FBgn0002775). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:7123213..7125533. Its molecular function is described by: methylated histone binding; RNA binding; mRNA binding; chromatin binding. It is involved in the biological process described with 10 unique terms, many of which group under: immune system process; regulation of immune system process; multicellular organismal process; dosage compensation by hyperactivation of X chromosome; dosage compensation. 43 alleles are reported. The phenotypes of these alleles manifest in: wing; eye. The phenotypic classes of alleles include: phenotype; increased mortality; increased mortality during development; lethal - all die before end of pupal stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

male-specific lethal 3

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
6
Biotypes
2
Peaks
34,388
Non-redundant peaks
30,344

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
38779
Official Gene Name
msl-3
JASPAR
Ensembl
FBgn0002775
UniProt
P50536
Genevisible
P50536
RefSeq
NM_079227
Aliases
msl-3
All peaks msl-3
Download BED file
Non redundant peaks msl-3
Download BED file
SEQUENCES msl-3
Download FASTA file
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Datasets Table for msl-3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
msl-3 Schneider-2 GFP GEO Drosophila melanogaster GSE107059 1,488
msl-3 Schneider-2 Trl GEO Drosophila melanogaster GSE107059 10,042
msl-3 Schneider-2 GEO Drosophila melanogaster GSE56101 8,794
msl-3 Schneider-2 priming GEO Drosophila melanogaster GSE56101 496
msl-3 embryo male_NC13 GEO Drosophila melanogaster GSE133637 11,557
msl-3 embryo male_NC14 GEO Drosophila melanogaster GSE133637 2,011
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks