ovo

Information ovo

Description

The gene ovo is referred to in FlyBase by the symbol Dmelovo (CG6824, FBgn0003028). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is X:5048273..5070929. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; transcription coactivator binding; sequence-specific DNA binding; DNA binding. It is involved in the biological process described with 16 unique terms, many of which group under: cuticle development; organelle organization; behavior; post-embryonic animal morphogenesis; cellular component organization. 226 alleles are reported. The phenotypes of these alleles manifest in: embryonic tagma; cellular anatomical entity; segmental subdivision of integument; cell projection; egg chorion. The phenotypic classes of alleles include: lethal; phenotype; fertile; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

ovo

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
12,926
Non-redundant peaks
12,926

TF Classification

Familly
C2H2 zinc finger factors
Sub Familly
More than 3 adjacent zinc finger factors

Source JASPAR

External IDs

NCBI Gene
31429
Official Gene Name
ovo
JASPAR
MA0126.1
Ensembl
FBgn0003028
UniProt
P51521
Genevisible
P51521
RefSeq
NM_167027
Aliases
CG15467; CG6824; DmelCG6824; Fs(1)K1103; Fs(1)K1237; Fs(1)K155; OVO; Ovo; Ovo-D; Shv; Svb; Svb/Ovo; fs(1)K1237; fs(1)M1; fs(1)M38; ovo; ovo/shavenbaby; ovo/svb; ovoD; svb
All peaks ovo
Download BED file
Non redundant peaks ovo
Download BED file
SEQUENCES ovo
Download FASTA file
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Datasets Table for ovo

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ovo adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR078TMF 12,926
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks