pan

Information pan

Description

The gene pangolin is referred to in FlyBase by the symbol Dmelpan (CG34403, FBgn0085432). It is a protein_coding_gene from Dmel. It has 9 annotated transcripts and 9 polypeptides (6 unique). Gene sequence location is 4:69326..114270. Its molecular function is described by 6 unique terms, many of which group under: protein binding; binding; transcription regulator activity; DNA-binding transcription factor activity; molecular function regulator. It is involved in the biological process described with 18 unique terms, many of which group under: molting cycle; negative regulation of metabolic process; gland morphogenesis; response to stimulus; blastoderm segmentation. 48 alleles are reported. The phenotypes of these alleles manifest in: antenna; embryonic epidermis; leg; embryonic procephalic segment; hemocyte. The phenotypic classes of alleles include: increased mortality; increased mortality during development; phenotype; size defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period.

Full Name

pangolin

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
5
Biotypes
1
Peaks
38,972
Non-redundant peaks
20,995

TF Classification

Familly
High-mobility group (HMG) domain factors
Sub Familly
High Mobility Group box (HMG)

Source JASPAR

External IDs

NCBI Gene
43769
Official Gene Name
pan
JASPAR
MA0237.2
Ensembl
FBgn0085432
UniProt
Q8IMA8
Genevisible
Q8IMA8
RefSeq
NM_166724
Aliases
pan
All peaks pan
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Non redundant peaks pan
Download BED file
SEQUENCES pan
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Datasets Table for pan

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
pan adult whole-fly ENCODE Drosophila melanogaster ENCSR636FRF 5,360
pan adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR058DSI 8,652
pan adult whole-fly ENCODE Drosophila melanogaster ENCSR074LKQ 10,122
pan adult whole-fly ENCODE Drosophila melanogaster ENCSR455AWG 6,260
pan adult whole-fly ENCODE Drosophila melanogaster ENCSR033IIP 8,578
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks