pho

Information pho

Description

The gene pleiohomeotic is referred to in FlyBase by the symbol Dmelpho (CG17743, FBgn0002521). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 4:1172469..1181628. Its molecular function is described by 7 unique terms, many of which group under: binding; DNA binding; nucleic acid binding; chromatin binding; heterocyclic compound binding. It is involved in the biological process described with 10 unique terms, many of which group under: neuron projection development; plasma membrane bounded cell projection morphogenesis; chromatin remodeling; cell morphogenesis involved in neuron differentiation; cell differentiation. 37 alleles are reported. The phenotypes of these alleles manifest in: pupa; gland; presumptive embryonic/larval central nervous system; abdominal segment 8; developing material anatomical entity. The phenotypic classes of alleles include: increased mortality during development; neuroanatomy defective; increased mortality; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, during early pupal stages, in adult female stages.

Full Name

pleiohomeotic

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
14
Biotypes
4
Peaks
123,602
Non-redundant peaks
57,309

TF Classification

Familly
C2H2 zinc finger factors
Sub Familly

Source JASPAR

External IDs

NCBI Gene
43819
Official Gene Name
pho
JASPAR
MA1460.1
Ensembl
FBgn0002521
UniProt
Q8ST83
Genevisible
Q8ST83
RefSeq
NM_166827
Aliases
pho
All peaks pho
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Non redundant peaks pho
Download BED file
SEQUENCES pho
Download FASTA file
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Datasets Table for pho

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
pho Schneider-2 GEO Drosophila melanogaster GSE84502 104
pho adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR681YMA 19,614
pho adult ovary GEO Drosophila melanogaster GSE145282 17,439
pho embryo 2h-4h GEO Drosophila melanogaster GSE114832 3,734
pho embryo 4h-12h GEO Drosophila melanogaster GSE60428 2,069
pho embryo 4h-12h_Phdel GEO Drosophila melanogaster GSE60428 9,547
pho embryo 14h-16h GEO Drosophila melanogaster GSE114832 1,789
pho embryo 4h-12h_WT GEO Drosophila melanogaster GSE60428 15,427
pho third-instar Spps-KO_imaginal-discs-and-brains GEO Drosophila melanogaster GSE102339 3,563
pho third-instar imaginal-discs-and-brains GEO Drosophila melanogaster GSE102339 9,037
pho third-instar CNS_imaginal-disk GEO Drosophila melanogaster GSE76892 3,054
pho third-instar CNS_imaginal-disk_en GEO Drosophila melanogaster GSE77341 5,411
pho third-instar CNS_imaginal-disk_inv-en GEO Drosophila melanogaster GSE77341 22,468
pho third-instar CNS_imaginal-disk_inv GEO Drosophila melanogaster GSE77341 10,346
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks