pum

Information pum

Description

The gene pumilio is referred to in FlyBase by the symbol Dmelpum (CG9755, FBgn0003165). It is a protein_coding_gene from Dmel. It has 8 annotated transcripts and 8 polypeptides (5 unique). Gene sequence location is 3R:9066343..9237682. Its molecular function is described by 6 unique terms, many of which group under: binding; nucleic acid binding; organic cyclic compound binding; heterocyclic compound binding; RNA binding. It is involved in the biological process described with 25 unique terms, many of which group under: movement of cell or subcellular component; cell cycle; behavior; synaptic signaling; regulation of signaling. 162 alleles are reported. The phenotypes of these alleles manifest in: intracellular anatomical structure; intracellular organelle; digestive system; abdominal segment 7; abdominal segment 4. The phenotypic classes of alleles include: phenotype; fertile; behavior defective; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

pumilio

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
18,121
Non-redundant peaks
18,121

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
41094
Official Gene Name
pum
JASPAR
Ensembl
FBgn0003165
UniProt
P25822
Genevisible
P25822
RefSeq
NM_176427
Aliases
pum
All peaks pum
Download BED file
Non redundant peaks pum
Download BED file
SEQUENCES pum
Download FASTA file
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Datasets Table for pum

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
pum adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR105OGL 18,121
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks