run
Information run
- Description
The gene runt is referred to in FlyBase by the symbol Dmel un (CG1849, FBgn0003300). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is X:20690670..20697321. Its molecular function is described by: sequence-specific DNA binding; ATP binding; DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 10 unique terms, many of which group under: central nervous system development; primary sex determination; stem cell differentiation; plasma membrane bounded cell projection organization; pattern specification process. 95 alleles are reported. The phenotypes of these alleles manifest in: presumptive embryonic/larval integumentary system; vch1 neuron; cuticle; gland; developing material anatomical entity. The phenotypic classes of alleles include: increased mortality; embryonic/larval segmentation phenotype; phenotype; pair rule phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 00-12 hour embryonic stages.
- Full Name
runt
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 21,485
- Non-redundant peaks
- 21,485
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
Datasets Table for run
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
run | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR392IEL | 21,485 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |