salr
Information salr
- Description
The gene spalt-related is referred to in FlyBase by the symbol Dmelsalr (CG4881, FBgn0000287). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 2L:11358873..11373636. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 8 unique terms, many of which group under: developmental process; antennal development; developmental process involved in reproduction; system process; sensory organ development. 16 alleles are reported. The phenotypes of these alleles manifest in: intracellular organelle; supramolecular polymer; I band; scutellar bristle; eo support cell. The phenotypic classes of alleles include: phenotype; increased mortality during development; lethal - all die before end of P-stage; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages.
- Full Name
spalt-related
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 2
- Biotypes
- 1
- Peaks
- 48,452
- Non-redundant peaks
- 34,394
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 34568
- Official Gene Name
- salr
- JASPAR
- Ensembl
- FBgn0000287
- UniProt
- Genevisible
- RefSeq
- NM_164965
- Aliases
- salr
Datasets Table for salr
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
salr | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR042XCV | 21,339 | ||
salr | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR943QAF | 27,113 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |