salr

Information salr

Description

The gene spalt-related is referred to in FlyBase by the symbol Dmelsalr (CG4881, FBgn0000287). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 2L:11358873..11373636. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 8 unique terms, many of which group under: developmental process; antennal development; developmental process involved in reproduction; system process; sensory organ development. 16 alleles are reported. The phenotypes of these alleles manifest in: intracellular organelle; supramolecular polymer; I band; scutellar bristle; eo support cell. The phenotypic classes of alleles include: phenotype; increased mortality during development; lethal - all die before end of P-stage; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages.

Full Name

spalt-related

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
48,452
Non-redundant peaks
34,394

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
34568
Official Gene Name
salr
JASPAR
Ensembl
FBgn0000287
UniProt
Genevisible
RefSeq
NM_164965
Aliases
salr
All peaks salr
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Non redundant peaks salr
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SEQUENCES salr
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Datasets Table for salr

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
salr adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR042XCV 21,339
salr adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR943QAF 27,113
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks