sd
Information sd
- Description
The gene scalloped is referred to in FlyBase by the symbol Dmelsd (CG8544, FBgn0003345). It is a protein_coding_gene from Dmel. It has 22 annotated transcripts and 22 polypeptides (7 unique). Gene sequence location is X:15804370..15827682. Its molecular function is described by 7 unique terms, many of which group under: binding; protein binding; nucleic acid binding; transcription cofactor binding; transcription factor binding. It is involved in the biological process described with 15 unique terms, many of which group under: hippo signaling; compound eye morphogenesis; embryonic organ development; leg disc morphogenesis; regulation of multicellular organismal development. 221 alleles are reported. The phenotypes of these alleles manifest in: non-connected developing system; female reproductive system; Kenyon cell; ganglion mother cell; unguis. The phenotypic classes of alleles include: phenotype; some die during pupal stage; fertile; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages.
- Full Name
scalloped
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 2
- Biotypes
- 2
- Peaks
- 37,107
- Non-redundant peaks
- 34,819
TF Classification
- Familly
- TEA domain factors
- Sub Familly
Source JASPAR
External IDs
- NCBI Gene
- 32536
- Official Gene Name
- sd
- JASPAR
- MA0243.1
- Ensembl
- FBgn0003345
- UniProt
- P30052
- Genevisible
- P30052
- RefSeq
- NM_206727
- Aliases
- CG8544; DROEXO; DROEXO2; DmelCG8544; EP(X)1088; EP1088; SD; Sd; TEAD; anon-EST:Liang-2.14; clone 2.14; l(1)G0239; l(1)G0262; l(1)G0309; l(1)G0315; l(1)G0483; l(1)HF394; l(1)III; sd; sp
Datasets Table for sd
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
sd | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR591PRH | 32,934 | ||
sd | third-instar | eye-disk | GEO | Drosophila melanogaster | GSE54601 | 4,173 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |