shn

Information shn

Description

The gene schnurri is referred to in FlyBase by the symbol Dmelshn (CG7734, FBgn0003396). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is 2R:11159086..11217394. Its molecular function is described by 6 unique terms, many of which group under: molecular function regulator; transcription regulator activity; transcription coregulator activity; binding; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 16 unique terms, many of which group under: embryo development; cellular response to endogenous stimulus; embryonic development via the syncytial blastoderm; cellular component organization; negative regulation of transcription by RNA polymerase II. 103 alleles are reported. The phenotypes of these alleles manifest in: sensillum; cell cluster organ; spiracular chamber; excretory system; circulatory system. The phenotypic classes of alleles include: lethal; phenotype; increased mortality; neuroanatomy defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.

Full Name

schnurri

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
51,843
Non-redundant peaks
44,196

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
36171
Official Gene Name
shn
JASPAR
Ensembl
FBgn0003396
UniProt
Genevisible
RefSeq
NM_206091
Aliases
shn
All peaks shn
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Non redundant peaks shn
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SEQUENCES shn
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Datasets Table for shn

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
shn adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR373BIM 26,676
shn Kc167 untreated GEO Drosophila melanogaster GSE68654 22,491
shn Kc167 DPP GEO Drosophila melanogaster GSE68654 2,676
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks