shn
Information shn
- Description
The gene schnurri is referred to in FlyBase by the symbol Dmelshn (CG7734, FBgn0003396). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is 2R:11159086..11217394. Its molecular function is described by 6 unique terms, many of which group under: molecular function regulator; transcription regulator activity; transcription coregulator activity; binding; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 16 unique terms, many of which group under: embryo development; cellular response to endogenous stimulus; embryonic development via the syncytial blastoderm; cellular component organization; negative regulation of transcription by RNA polymerase II. 103 alleles are reported. The phenotypes of these alleles manifest in: sensillum; cell cluster organ; spiracular chamber; excretory system; circulatory system. The phenotypic classes of alleles include: lethal; phenotype; increased mortality; neuroanatomy defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
- Full Name
schnurri
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 3
- Biotypes
- 2
- Peaks
- 51,843
- Non-redundant peaks
- 44,196
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 36171
- Official Gene Name
- shn
- JASPAR
- Ensembl
- FBgn0003396
- UniProt
- Genevisible
- RefSeq
- NM_206091
- Aliases
- shn
Datasets Table for shn
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
shn | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR373BIM | 26,676 | ||
shn | Kc167 | untreated | GEO | Drosophila melanogaster | GSE68654 | 22,491 | ||
shn | Kc167 | DPP | GEO | Drosophila melanogaster | GSE68654 | 2,676 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |