sqz

Information sqz

Description

The gene squeeze is referred to in FlyBase by the symbol Dmelsqz (CG5557, FBgn0010768). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3R:19164211..19170576. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II; neuroblast development; dendrite guidance; neuron development. 26 alleles are reported. The phenotypes of these alleles manifest in: chorionic specialization; embryonic/larval endocrine system; region of integument; adult uniglomerular antennal lobe projection neuron lPN; ovary. The phenotypic classes of alleles include: increased mortality; increased mortality during development; lethal; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, during early pupal stages, in adult female stages.

Full Name

squeeze

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
25,521
Non-redundant peaks
25,521

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
42300
Official Gene Name
sqz
JASPAR
Ensembl
FBgn0010768
UniProt
Q9VDZ3
Genevisible
Q9VDZ3
RefSeq
NM_079679
Aliases
sqz
All peaks sqz
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Non redundant peaks sqz
Download BED file
SEQUENCES sqz
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Datasets Table for sqz

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
sqz adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR923VWW 25,521
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks