ss

Information ss

Description

The gene spineless is referred to in FlyBase by the symbol Dmelss (CG6993, FBgn0003513). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 3R:16374434..16403690. Its molecular function is described by: protein heterodimerization activity; transcription regulatory region sequence-specific DNA binding; nuclear receptor activity; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 12 unique terms, many of which group under: system process; plasma membrane bounded cell projection organization; reproductive process; leg disc morphogenesis; behavior. 99 alleles are reported. The phenotypes of these alleles manifest in: segmental subdivision of integument; embryonic/larval sensillum; labial segment; tarsal segment 3; abdomen. The phenotypic classes of alleles include: behavior defective; increased mortality during development; sterile; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of extremely low expression. Peak expression observed within 06-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult male stages.

Full Name

spineless

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
56,474
Non-redundant peaks
35,722

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
41988
Official Gene Name
ss
JASPAR
Ensembl
FBgn0003513
UniProt
Genevisible
RefSeq
NM_057400
Aliases
ss
All peaks ss
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Non redundant peaks ss
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SEQUENCES ss
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Datasets Table for ss

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ss adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR583EFI 26,816
ss adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR893CTZ 29,658
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks