sv
Information sv
- Description
The gene shaven is referred to in FlyBase by the symbol Dmelsv (CG11049, FBgn0005561). It is a protein_coding_gene from Dmel. It has 7 annotated transcripts and 7 polypeptides (all unique). Gene sequence location is 4:1088798..1113317. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding; cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with 6 unique terms, many of which group under: regulation of photoreceptor cell differentiation; regulation of cell fate specification; neuron differentiation; cellular developmental process; eye development. 62 alleles are reported. The phenotypes of these alleles manifest in: rhabdomere; nephrocyte; antennal segment; plasma membrane bounded cell projection; developing material anatomical entity. The phenotypic classes of alleles include: increased mortality; lethal - all die before end of first instar larval stage; viable; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages.
- Full Name
shaven
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 13,869
- Non-redundant peaks
- 13,869
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 43825
- Official Gene Name
- sv
- JASPAR
- Ensembl
- FBgn0005561
- UniProt
- Genevisible
- RefSeq
- NM_166822
- Aliases
- sv
Datasets Table for sv
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
sv | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR570ADO | 13,869 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |