tio

Information tio

Description

The gene tiptop is referred to in FlyBase by the symbol Dmel io (CG12630, FBgn0028979). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:22019208..22025734. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; DNA binding. It is involved in the biological process described with 6 unique terms, many of which group under: system development; epidermis development; anatomical structure development; Malpighian tubule stellate cell differentiation; negative regulation of metabolic process. 22 alleles are reported. The phenotypes of these alleles manifest in: somatic cell; larval thorax; integumentary system; portion of tissue; denticle. The phenotypic classes of alleles include: short lived; lethal - all die during embryonic stage; lethal; viable; visible; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-18 embryonic stages, at stages throughout the pupal period, in adult male stages.

Full Name

tiptop

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
16,912
Non-redundant peaks
16,912

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
44272
Official Gene Name
tio
JASPAR
Ensembl
FBgn0028979
UniProt
Q9U3V5
Genevisible
Q9U3V5
RefSeq
NM_079994
Aliases
tio
All peaks tio
Download BED file
Non redundant peaks tio
Download BED file
SEQUENCES tio
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for tio

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
tio adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR748DHJ 16,912
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks