trr
Information trr
- Description
The gene trithorax-related is referred to in FlyBase by the symbol Dmel rr (CG3848, FBgn0023518). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is X:1881313..1889950. Its molecular function is described by 6 unique terms, many of which group under: binding; protein binding; sequence-specific double-stranded DNA binding; histone binding; transcription coregulator activity. It is involved in the biological process described with 8 unique terms, many of which group under: organelle organization; macromolecule methylation; protein metabolic process; protein alkylation; anatomical structure development. 25 alleles are reported. The phenotypes of these alleles manifest in: morphogenetic furrow; intracellular anatomical structure; cell component; dorsal thoracic disc; visual system neuron. The phenotypic classes of alleles include: phenotype; fertile; increased mortality; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages.
- Full Name
trithorax-related
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 6
- Biotypes
- 2
- Peaks
- 64,082
- Non-redundant peaks
- 27,962
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
Datasets Table for trr
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
trr | Schneider-2 | WT | GEO | Drosophila melanogaster | GSE41440 | 6,711 | ||
trr | Schneider-2 | homemade | GEO | Drosophila melanogaster | GSE81795 | 5,584 | ||
trr | adult | 0-5d_head | GEO | Drosophila melanogaster | GSE89459 | 9,341 | ||
trr | adult | 2-4d_brain_yf_homemade | GEO | Drosophila melanogaster | GSE95781 | 17,176 | ||
trr | adult | 2-4d_brain_ca | GEO | Drosophila melanogaster | GSE95781 | 16,450 | ||
trr | adult | brain_WT_homemade | GEO | Drosophila melanogaster | GSE95781 | 8,820 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |