trx
Information trx
- Description
The gene trithorax is referred to in FlyBase by the symbol Dmel rx (CG8651, FBgn0003862). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (2 unique). Gene sequence location is 3R:14263358..14286903. Its molecular function is described by 8 unique terms, many of which group under: binding; protein binding; organic cyclic compound binding; DNA-binding transcription factor activity; protein dimerization activity. It is involved in the biological process described with 11 unique terms, many of which group under: system development; developmental process; multicellular organism development; macromolecule methylation; anatomical structure development. 140 alleles are reported. The phenotypes of these alleles manifest in: type I neuroblast; abdominal tergite 6; epithelium; adult external mesothorax; ganglion. The phenotypic classes of alleles include: increased mortality during development; viable; lethal; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
- Full Name
trithorax
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 3
- Biotypes
- 2
- Peaks
- 25,436
- Non-redundant peaks
- 15,633
TF Classification
- Familly
- Nuclear receptors with C4 zinc fingers
- Sub Familly
Source JASPAR
Datasets Table for trx
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
trx | Schneider-2 | NT_homemade | GEO | Drosophila melanogaster | GSE81795 | 9,722 | ||
trx | Schneider-2 | CT_homemade | GEO | Drosophila melanogaster | GSE81795 | 5,017 | ||
trx | S2-DRSC | GEO | Drosophila melanogaster | GSE24521 | 10,697 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |