tup
Information tup
- Description
The gene tailup is referred to in FlyBase by the symbol Dmel up (CG10619, FBgn0003896). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2L:18859507..18881261. Its molecular function is described by 6 unique terms, many of which group under: binding; DNA binding; regulatory region nucleic acid binding; nucleic acid binding; sequence-specific double-stranded DNA binding. It is involved in the biological process described with 20 unique terms, many of which group under: cell fate determination; positive regulation of RNA biosynthetic process; dendrite morphogenesis; tissue development; muscle cell fate commitment. 30 alleles are reported. The phenotypes of these alleles manifest in: embryonic head; developing embryonic structure; eye; larval thoracic segment; squamous epithelium. The phenotypic classes of alleles include: increased mortality during development; lethal - all die before end of second instar larval stage; lethal; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages.
- Full Name
tailup
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 15,434
- Non-redundant peaks
- 15,434
TF Classification
- Familly
- Homeo domain factors
- Sub Familly
- HD-LIM factors
Source JASPAR
External IDs
- NCBI Gene
- 35147
- Official Gene Name
- tup
- JASPAR
- MA0248.1
- Ensembl
- FBgn0003896
- UniProt
- Genevisible
- RefSeq
- NM_057427
- Aliases
- tup
Datasets Table for tup
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
tup | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR502JHR | 15,434 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |