tup

Information tup

Description

The gene tailup is referred to in FlyBase by the symbol Dmel up (CG10619, FBgn0003896). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2L:18859507..18881261. Its molecular function is described by 6 unique terms, many of which group under: binding; DNA binding; regulatory region nucleic acid binding; nucleic acid binding; sequence-specific double-stranded DNA binding. It is involved in the biological process described with 20 unique terms, many of which group under: cell fate determination; positive regulation of RNA biosynthetic process; dendrite morphogenesis; tissue development; muscle cell fate commitment. 30 alleles are reported. The phenotypes of these alleles manifest in: embryonic head; developing embryonic structure; eye; larval thoracic segment; squamous epithelium. The phenotypic classes of alleles include: increased mortality during development; lethal - all die before end of second instar larval stage; lethal; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages.

Full Name

tailup

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
15,434
Non-redundant peaks
15,434

TF Classification

Familly
Homeo domain factors
Sub Familly
HD-LIM factors

Source JASPAR

External IDs

NCBI Gene
35147
Official Gene Name
tup
JASPAR
MA0248.1
Ensembl
FBgn0003896
UniProt
Genevisible
RefSeq
NM_057427
Aliases
tup
All peaks tup
Download BED file
Non redundant peaks tup
Download BED file
SEQUENCES tup
Download FASTA file
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Datasets Table for tup

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
tup adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR502JHR 15,434
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks