vtd
Information vtd
- Description
The gene verthandi is referred to in FlyBase by the symbol Dmelvtd (CG17436, FBgn0260987). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 3L:27136525..27157999. Its molecular function is described by: chromatin binding. It is involved in the biological process described with 8 unique terms, many of which group under: mitotic cell cycle; cell cycle; synaptonemal complex organization; metabolic process; organic substance metabolic process. 51 alleles are reported. The phenotypes of these alleles manifest in: wing disc; intracellular anatomical structure; sensillum; gland; pronucleus. The phenotypic classes of alleles include: increased mortality during development; increased mortality; lethal; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in adult female stages.
- Full Name
verthandi
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 6
- Biotypes
- 1
- Peaks
- 72,614
- Non-redundant peaks
- 33,290
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 3354896
- Official Gene Name
- vtd
- JASPAR
- Ensembl
- FBgn0260987
- UniProt
- Genevisible
- RefSeq
- NM_001300711
- Aliases
- vtd
Datasets Table for vtd
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
vtd | Kc167 | GEO | Drosophila melanogaster | GSE54529 | 19,726 | |||
vtd | Kc167 | NT | GEO | Drosophila melanogaster | GSE62904 | 15,187 | ||
vtd | Kc167 | FLV | GEO | Drosophila melanogaster | GSE118756 | 7,570 | ||
vtd | Kc167 | GEO | Drosophila melanogaster | GSE118756 | 6,817 | |||
vtd | Kc167 | CTCF-RNAi | GEO | Drosophila melanogaster | GSE54529 | 10,136 | ||
vtd | Kc167 | HS | GEO | Drosophila melanogaster | GSE62904 | 13,178 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |